Dca12393.1
Annotation
- 4-exons
- f-1
- sp|D7TZ55_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0077g00140#unknown#0F0P0C
- Os02t0290300-01 WD40/YVTN repeat-like domain containing protein.
- Repeat List (scaffold1566)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12393.1 |
37 |
145 |
168 |
56.54 |
109 |
88 |
4e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7TZ55_VITVI |
657 |
765 |
773 |
14.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12393.1 |
37 |
145 |
168 |
49.4 |
109 |
77 |
6e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0290300-01 |
670 |
778 |
787 |
13.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1566 |
Augustus |
mRNA |
43656 |
46053 |
. |
+ |
. |
ID=Dca12393.1;Parent=Dca12393 |
| scaffold1566 |
Augustus |
exon |
43656 |
43889 |
. |
+ |
. |
ID=Dca12393.1.exon1;Parent=Dca12393.1 |
| scaffold1566 |
Augustus |
exon |
44247 |
44360 |
. |
+ |
. |
ID=Dca12393.1.exon2;Parent=Dca12393.1 |
| scaffold1566 |
Augustus |
exon |
44445 |
44531 |
. |
+ |
. |
ID=Dca12393.1.exon3;Parent=Dca12393.1 |
| scaffold1566 |
Augustus |
exon |
45982 |
46053 |
. |
+ |
. |
ID=Dca12393.1.exon4;Parent=Dca12393.1 |
