Carnation DB

Dca124.1

Annotation

6-exons
f-1
sp|B9GQB8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_552196#GO:0016020;GO:0055085#0F1P1C
AT4G00290.1 | Symbols: | Mechanosensitive ion channel protein | chr4:123097-125300 REVERSE LENGTH=497
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca124.1	1	531	531	52.35	531	51	4e-151
Target_name	Start	End	Length	Cov(%)
sp\|B9GQB8_POPTR	1	534	534	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca124.1	1	523	531	50.84	523	52	2e-143
Target_name	Start	End	Length	Cov(%)
AT4G00290.1	1	490	497	98.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augus-PASA	mRNA	1097911	1100359	.	+	.	ID=Dca124.1;Parent=Dca124
scaffold1	Augus-PASA	exon	1097911	1098683	.	+	.	ID=Dca124.1.exon1;Parent=Dca124.1
scaffold1	Augus-PASA	exon	1098771	1099048	.	+	.	ID=Dca124.1.exon2;Parent=Dca124.1
scaffold1	Augus-PASA	exon	1099214	1099314	.	+	.	ID=Dca124.1.exon3;Parent=Dca124.1
scaffold1	Augus-PASA	exon	1099637	1099744	.	+	.	ID=Dca124.1.exon4;Parent=Dca124.1
scaffold1	Augus-PASA	exon	1099907	1100128	.	+	.	ID=Dca124.1.exon5;Parent=Dca124.1
scaffold1	Augustus	exon	1100246	1100359	.	+	.	ID=Dca124.1.exon6;Parent=Dca124.1