Dca12419.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold15681)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12419.1 |
49 |
444 |
447 |
31.09 |
396 |
30 |
3e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
33 |
470 |
1501 |
29.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12419.1 |
348 |
431 |
447 |
6.71 |
84 |
35 |
6e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0566300-02 |
414 |
497 |
536 |
15.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15681 |
Augustus |
mRNA |
1 |
1433 |
. |
- |
. |
ID=Dca12419.1;Parent=Dca12419 |
| scaffold15681 |
Augustus |
exon |
1 |
1073 |
. |
- |
. |
ID=Dca12419.1.exon1;Parent=Dca12419.1 |
| scaffold15681 |
Augustus |
exon |
1164 |
1433 |
. |
- |
. |
ID=Dca12419.1.exon2;Parent=Dca12419.1 |
