Carnation DB

Dca12456.1

Annotation

5-exons
f-1
sp|F6HWL4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0283g00060#GO:0005739#0F0P1C
Repeat List (scaffold157)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12456.1	1	184	184	60.86	184	60	3e-56
Target_name	Start	End	Length	Cov(%)
sp\|F6HWL4_VITVI	1	187	187	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12456.1	56	184	184	50	129	67	4e-51
Target_name	Start	End	Length	Cov(%)
AT5G51040.3	60	197	197	70.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold157	Augus-PASA	mRNA	237395	239098	.	-	.	ID=Dca12456.1;Parent=Dca12456
scaffold157	Augus-PASA	exon	237395	237541	.	-	.	ID=Dca12456.1.exon1;Parent=Dca12456.1
scaffold157	Augus-PASA	exon	237622	237690	.	-	.	ID=Dca12456.1.exon2;Parent=Dca12456.1
scaffold157	Augus-PASA	exon	238114	238240	.	-	.	ID=Dca12456.1.exon3;Parent=Dca12456.1
scaffold157	Augus-PASA	exon	238779	238868	.	-	.	ID=Dca12456.1.exon4;Parent=Dca12456.1
scaffold157	Augus-PASA	exon	238977	239098	.	-	.	ID=Dca12456.1.exon5;Parent=Dca12456.1