Carnation DB

Dca12465.1

Annotation

9-exons
f-1
sp|F6HUU1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0066g00390#GO:0008168#1F0P0C
sp|B9S661_RICCO#Cerebral protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1064710#GO:0008168#1F0P0C
Repeat List (scaffold1570)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12465.1	6	278	278	67.62	273	69	6e-110
Target_name	Start	End	Length	Cov(%)
sp\|F6HUU1_VITVI	2	263	263	99.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12465.1	32	278	278	59.35	247	67	5e-98
Target_name	Start	End	Length	Cov(%)
Os02t0593900-01	49	292	293	83.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1570	Augustus	mRNA	52256	57158	.	-	.	ID=Dca12465.1;Parent=Dca12465
scaffold1570	Augustus	exon	52256	52327	.	-	.	ID=Dca12465.1.exon1;Parent=Dca12465.1
scaffold1570	Augustus	exon	52516	52560	.	-	.	ID=Dca12465.1.exon2;Parent=Dca12465.1
scaffold1570	Augustus	exon	52889	53003	.	-	.	ID=Dca12465.1.exon3;Parent=Dca12465.1
scaffold1570	Augustus	exon	53085	53191	.	-	.	ID=Dca12465.1.exon4;Parent=Dca12465.1
scaffold1570	Augustus	exon	53678	53772	.	-	.	ID=Dca12465.1.exon5;Parent=Dca12465.1
scaffold1570	Augustus	exon	54936	55050	.	-	.	ID=Dca12465.1.exon6;Parent=Dca12465.1
scaffold1570	Augustus	exon	55763	55814	.	-	.	ID=Dca12465.1.exon7;Parent=Dca12465.1
scaffold1570	Augustus	exon	56794	56855	.	-	.	ID=Dca12465.1.exon8;Parent=Dca12465.1
scaffold1570	Augustus	exon	56985	57158	.	-	.	ID=Dca12465.1.exon9;Parent=Dca12465.1