Carnation DB

Dca12467.1

Annotation

5-exons
f-1
sp|B9HLP9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_803836#GO:0016788;GO:0006629#1F1P0C
sp|B9SVM3_RICCO#Alpha-L-fucosidase 2, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0794040#GO:0016788;GO:0006629#1F1P0C
Repeat List (scaffold1570)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12467.1	19	391	393	61.83	373	66	1e-149
Target_name	Start	End	Length	Cov(%)
sp\|B9HLP9_POPTR	1	370	374	98.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12467.1	6	391	393	58.52	386	60	2e-140
Target_name	Start	End	Length	Cov(%)
AT3G26430.1	1	380	380	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1570	Augustus	mRNA	78478	80959	.	-	.	ID=Dca12467.1;Parent=Dca12467
scaffold1570	Augustus	exon	78478	78743	.	-	.	ID=Dca12467.1.exon1;Parent=Dca12467.1
scaffold1570	Augustus	exon	79557	79827	.	-	.	ID=Dca12467.1.exon2;Parent=Dca12467.1
scaffold1570	Augustus	exon	80010	80179	.	-	.	ID=Dca12467.1.exon3;Parent=Dca12467.1
scaffold1570	Augustus	exon	80311	80520	.	-	.	ID=Dca12467.1.exon4;Parent=Dca12467.1
scaffold1570	Augustus	exon	80695	80959	.	-	.	ID=Dca12467.1.exon5;Parent=Dca12467.1