Carnation DB

Dca12487.1

Annotation

5-exons
f-1
sp|B9GH83_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_641544#unknown#0F0P0C
sp|B9S163_RICCO#O-acetyltransferase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0634180#GO:0016740#1F0P0C
Repeat List (scaffold15712)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12487.1	2	195	195	84.1	194	85	2e-100
Target_name	Start	End	Length	Cov(%)
sp\|B9GH83_POPTR	234	427	543	35.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12487.1	1	195	195	80.51	195	81	6e-99
Target_name	Start	End	Length	Cov(%)
AT1G29890.2	277	471	584	33.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15712	Augustus	mRNA	254	1285	.	-	.	ID=Dca12487.1;Parent=Dca12487
scaffold15712	Augustus	exon	254	287	.	-	.	ID=Dca12487.1.exon1;Parent=Dca12487.1
scaffold15712	Augustus	exon	432	520	.	-	.	ID=Dca12487.1.exon2;Parent=Dca12487.1
scaffold15712	Augustus	exon	593	679	.	-	.	ID=Dca12487.1.exon3;Parent=Dca12487.1
scaffold15712	Augustus	exon	772	887	.	-	.	ID=Dca12487.1.exon4;Parent=Dca12487.1
scaffold15712	Augustus	exon	1024	1285	.	-	.	ID=Dca12487.1.exon5;Parent=Dca12487.1