Carnation DB

Dca12494.1

Annotation

6-exons
f-1
sp|B9SAF1_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0585680#unknown#0F0P0C
Repeat List (scaffold1572)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12494.1	1	411	411	80.04	411	81	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SAF1_RICCO	114	524	524	78.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12494.1	1	411	411	79.31	411	80	0
Target_name	Start	End	Length	Cov(%)
AT4G27020.1	113	523	523	78.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1572	Augustus	mRNA	37118	43528	.	+	.	ID=Dca12494.1;Parent=Dca12494
scaffold1572	Augustus	exon	37118	37231	.	+	.	ID=Dca12494.1.exon1;Parent=Dca12494.1
scaffold1572	Augustus	exon	37315	37680	.	+	.	ID=Dca12494.1.exon2;Parent=Dca12494.1
scaffold1572	Augus-PASA	exon	41355	41600	.	+	.	ID=Dca12494.1.exon3;Parent=Dca12494.1
scaffold1572	Augus-PASA	exon	42089	42181	.	+	.	ID=Dca12494.1.exon4;Parent=Dca12494.1
scaffold1572	Augus-PASA	exon	42584	42784	.	+	.	ID=Dca12494.1.exon5;Parent=Dca12494.1
scaffold1572	Augus-PASA	exon	43313	43528	.	+	.	ID=Dca12494.1.exon6;Parent=Dca12494.1