Dca12507.1
Annotation
- 4-exons
- f-1
- sp|E4MX68_THEHA#mRNA, clone: RTFL01-17-E04#Thellungiella halophila (Salt cress)#unknown#GO:0003677;GO:0003700;GO:0016987;GO:0006352#3F1P0C
- Repeat List (scaffold1573)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12507.1 |
1 |
171 |
241 |
29.04 |
171 |
40 |
9e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E4MX68_THEHA |
1 |
167 |
547 |
30.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12507.1 |
1 |
171 |
241 |
28.21 |
171 |
39 |
6e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G36990.1 |
1 |
167 |
547 |
30.53 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1573 |
Augus-PASA |
mRNA |
1214 |
2984 |
. |
+ |
. |
ID=Dca12507.1;Parent=Dca12507 |
| scaffold1573 |
Augus-PASA |
exon |
1214 |
1301 |
. |
+ |
. |
ID=Dca12507.1.exon1;Parent=Dca12507.1 |
| scaffold1573 |
Augus-PASA |
exon |
2042 |
2187 |
. |
+ |
. |
ID=Dca12507.1.exon2;Parent=Dca12507.1 |
| scaffold1573 |
Augustus |
exon |
2390 |
2511 |
. |
+ |
. |
ID=Dca12507.1.exon3;Parent=Dca12507.1 |
| scaffold1573 |
Augustus |
exon |
2615 |
2984 |
. |
+ |
. |
ID=Dca12507.1.exon4;Parent=Dca12507.1 |
