Carnation DB

Dca12551.1

Annotation

10-exons
f-1
sp|B9HWF4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1090851#GO:0016787#1F0P0C
AT1G25375.1 | Symbols: | Metallo-hydrolase/oxidoreductase superfamily protein | chr1:8900279-8903220 REVERSE LENGTH=524
Repeat List (scaffold1576)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12551.1	1	313	331	61.63	313	66	4e-121
Target_name	Start	End	Length	Cov(%)
sp\|B9HWF4_POPTR	151	463	485	64.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12551.1	1	320	331	58.3	320	61	2e-111
Target_name	Start	End	Length	Cov(%)
AT1G25375.1	154	472	524	60.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1576	Augustus	mRNA	75252	81859	.	-	.	ID=Dca12551.1;Parent=Dca12551
scaffold1576	Augustus	exon	75252	75317	.	-	.	ID=Dca12551.1.exon1;Parent=Dca12551.1
scaffold1576	Augustus	exon	75915	76089	.	-	.	ID=Dca12551.1.exon2;Parent=Dca12551.1
scaffold1576	Augustus	exon	76291	76400	.	-	.	ID=Dca12551.1.exon3;Parent=Dca12551.1
scaffold1576	Augustus	exon	76851	76896	.	-	.	ID=Dca12551.1.exon4;Parent=Dca12551.1
scaffold1576	Augustus	exon	77602	77675	.	-	.	ID=Dca12551.1.exon5;Parent=Dca12551.1
scaffold1576	Augustus	exon	77889	77974	.	-	.	ID=Dca12551.1.exon6;Parent=Dca12551.1
scaffold1576	Augustus	exon	78248	78325	.	-	.	ID=Dca12551.1.exon7;Parent=Dca12551.1
scaffold1576	Augustus	exon	79228	79303	.	-	.	ID=Dca12551.1.exon8;Parent=Dca12551.1
scaffold1576	Augustus	exon	80581	80763	.	-	.	ID=Dca12551.1.exon9;Parent=Dca12551.1
scaffold1576	Augustus	exon	81758	81859	.	-	.	ID=Dca12551.1.exon10;Parent=Dca12551.1