Carnation DB

Dca12557.1

Annotation

8-exons
f-1
sp|D7SW33_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0031g01320#GO:0005634;GO:0046983;GO:0043565;GO:0003700#3F0P1C
AT5G10030.1 | Symbols: TGA4, OBF4 | TGACG motif-binding factor 4 | chr5:3137648-3139295 REVERSE LENGTH=364
Repeat List (scaffold1577)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12557.1	14	358	359	71.03	345	74	1e-151
Target_name	Start	End	Length	Cov(%)
sp\|D7SW33_VITVI	1	347	349	99.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12557.1	1	358	359	68.24	358	68	2e-142
Target_name	Start	End	Length	Cov(%)
AT5G10030.1	1	362	364	99.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1577	Augus-PASA	mRNA	28198	30873	.	-	.	ID=Dca12557.1;Parent=Dca12557
scaffold1577	Augus-PASA	exon	28198	28347	.	-	.	ID=Dca12557.1.exon1;Parent=Dca12557.1
scaffold1577	Augus-PASA	exon	28670	28897	.	-	.	ID=Dca12557.1.exon2;Parent=Dca12557.1
scaffold1577	Augus-PASA	exon	29142	29413	.	-	.	ID=Dca12557.1.exon3;Parent=Dca12557.1
scaffold1577	Augus-PASA	exon	30043	30100	.	-	.	ID=Dca12557.1.exon4;Parent=Dca12557.1
scaffold1577	Augus-PASA	exon	30206	30283	.	-	.	ID=Dca12557.1.exon5;Parent=Dca12557.1
scaffold1577	Augus-PASA	exon	30375	30434	.	-	.	ID=Dca12557.1.exon6;Parent=Dca12557.1
scaffold1577	Augus-PASA	exon	30529	30603	.	-	.	ID=Dca12557.1.exon7;Parent=Dca12557.1
scaffold1577	Augustus	exon	30715	30873	.	-	.	ID=Dca12557.1.exon8;Parent=Dca12557.1