Dca12573.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1578)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12573.1 |
2 |
248 |
267 |
58.42 |
247 |
61 |
8e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
135 |
391 |
964 |
26.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12573.1 |
2 |
219 |
267 |
32.58 |
218 |
38 |
9e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
549 |
779 |
1428 |
16.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1578 |
Augustus |
mRNA |
9306 |
14188 |
. |
- |
. |
ID=Dca12573.1;Parent=Dca12573 |
| scaffold1578 |
Augustus |
exon |
9306 |
9315 |
. |
- |
. |
ID=Dca12573.1.exon1;Parent=Dca12573.1 |
| scaffold1578 |
Augustus |
exon |
13395 |
14188 |
. |
- |
. |
ID=Dca12573.1.exon2;Parent=Dca12573.1 |
