Dca12591.1
Annotation
- 4-exons
- f-1
- sp|B9HBS4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_560046#unknown#0F0P0C
- sp|B9SGX7_RICCO#Expressed protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0820860#unknown#0F0P0C
- Repeat List (scaffold1579)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12591.1 |
1 |
475 |
475 |
50.1 |
475 |
47 |
1e-95
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HBS4_POPTR |
1 |
467 |
467 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12591.1 |
1 |
167 |
475 |
24.63 |
167 |
70 |
1e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0500200-01 |
1 |
169 |
514 |
32.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1579 |
Augus-PASA |
mRNA |
6120 |
8869 |
. |
+ |
. |
ID=Dca12591.1;Parent=Dca12591 |
| scaffold1579 |
Augus-PASA |
exon |
6120 |
6307 |
. |
+ |
. |
ID=Dca12591.1.exon1;Parent=Dca12591.1 |
| scaffold1579 |
Augus-PASA |
exon |
6850 |
6991 |
. |
+ |
. |
ID=Dca12591.1.exon2;Parent=Dca12591.1 |
| scaffold1579 |
Augus-PASA |
exon |
7376 |
7537 |
. |
+ |
. |
ID=Dca12591.1.exon3;Parent=Dca12591.1 |
| scaffold1579 |
Augus-PASA |
exon |
7934 |
8869 |
. |
+ |
. |
ID=Dca12591.1.exon4;Parent=Dca12591.1 |
