Carnation DB

Dca12598.1

Annotation

9-exons
f-1
sp|D7U7E2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0013g01920#GO:0000151;GO:0005524;GO:0004674;GO:0004842;GO:0006950#3F1P1C
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase family protein | chr5:24748325-24751805 FORWARD LENGTH=860
Repeat List (scaffold1579)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12598.1	11	791	802	57.35	781	59	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U7E2_VITVI	23	781	784	96.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12598.1	11	800	802	51.74	790	50	0
Target_name	Start	End	Length	Cov(%)
AT5G61550.2	24	852	860	96.39

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1579	Augustus	mRNA	51605	55019	.	-	.	ID=Dca12598.1;Parent=Dca12598
scaffold1579	Augustus	exon	51605	51814	.	-	.	ID=Dca12598.1.exon1;Parent=Dca12598.1
scaffold1579	Augustus	exon	51903	52661	.	-	.	ID=Dca12598.1.exon2;Parent=Dca12598.1
scaffold1579	Augustus	exon	52757	53185	.	-	.	ID=Dca12598.1.exon3;Parent=Dca12598.1
scaffold1579	Augustus	exon	53278	53379	.	-	.	ID=Dca12598.1.exon4;Parent=Dca12598.1
scaffold1579	Augustus	exon	53471	53772	.	-	.	ID=Dca12598.1.exon5;Parent=Dca12598.1
scaffold1579	Augustus	exon	53924	54120	.	-	.	ID=Dca12598.1.exon6;Parent=Dca12598.1
scaffold1579	Augustus	exon	54337	54458	.	-	.	ID=Dca12598.1.exon7;Parent=Dca12598.1
scaffold1579	Augustus	exon	54551	54672	.	-	.	ID=Dca12598.1.exon8;Parent=Dca12598.1
scaffold1579	Augustus	exon	54854	55019	.	-	.	ID=Dca12598.1.exon9;Parent=Dca12598.1
scaffold1579	Augustus	mRNA	51605	52331	.	-	.	ID=Dca12598.2;Parent=Dca12598
scaffold1579	Augustus	exon	51605	51814	.	-	.	ID=Dca12598.2.exon1;Parent=Dca12598.2
scaffold1579	Augustus	exon	51903	52331	.	-	.	ID=Dca12598.2.exon2;Parent=Dca12598.2