Carnation DB

Dca12604.1

Annotation

7-exons
f-1
sp|B9MYF1_POPTR#Aminotransferase family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=AMT2#GO:0016847;GO:0030170#2F0P0C
Repeat List (scaffold158)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12604.1	3	421	426	57.27	419	59	1e-141
Target_name	Start	End	Length	Cov(%)
sp\|B9MYF1_POPTR	2	417	418	99.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12604.1	1	421	426	53.52	421	55	5e-136
Target_name	Start	End	Length	Cov(%)
AT5G36160.1	1	417	420	99.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold158	Augus-PASA	mRNA	19673	21533	.	+	.	ID=Dca12604.1;Parent=Dca12604
scaffold158	Augus-PASA	exon	19673	19956	.	+	.	ID=Dca12604.1.exon1;Parent=Dca12604.1
scaffold158	Augus-PASA	exon	20052	20391	.	+	.	ID=Dca12604.1.exon2;Parent=Dca12604.1
scaffold158	Augus-PASA	exon	20477	20695	.	+	.	ID=Dca12604.1.exon3;Parent=Dca12604.1
scaffold158	Augus-PASA	exon	20858	20917	.	+	.	ID=Dca12604.1.exon4;Parent=Dca12604.1
scaffold158	Augus-PASA	exon	20990	21145	.	+	.	ID=Dca12604.1.exon5;Parent=Dca12604.1
scaffold158	Augus-PASA	exon	21223	21316	.	+	.	ID=Dca12604.1.exon6;Parent=Dca12604.1
scaffold158	Augus-PASA	exon	21406	21533	.	+	.	ID=Dca12604.1.exon7;Parent=Dca12604.1