Carnation DB

Dca12605.1

Annotation

8-exons
f-1
sp|B9RVU8_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1173020#GO:0005783#0F0P1C
AT4G28430.1 | Symbols: | Reticulon family protein | chr4:14057846-14059772 FORWARD LENGTH=457
Repeat List (scaffold158)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12605.1	4	388	435	47.35	385	51	1e-98
Target_name	Start	End	Length	Cov(%)
sp\|B9RVU8_RICCO	9	398	444	87.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12605.1	5	435	435	47.58	431	45	1e-86
Target_name	Start	End	Length	Cov(%)
AT4G28430.1	6	454	457	98.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold158	Augustus	mRNA	23135	25626	.	+	.	ID=Dca12605.1;Parent=Dca12605
scaffold158	Augustus	exon	23135	23627	.	+	.	ID=Dca12605.1.exon1;Parent=Dca12605.1
scaffold158	Augustus	exon	24206	24359	.	+	.	ID=Dca12605.1.exon2;Parent=Dca12605.1
scaffold158	Augustus	exon	24451	24525	.	+	.	ID=Dca12605.1.exon3;Parent=Dca12605.1
scaffold158	Augustus	exon	24623	24764	.	+	.	ID=Dca12605.1.exon4;Parent=Dca12605.1
scaffold158	Augustus	exon	24856	24925	.	+	.	ID=Dca12605.1.exon5;Parent=Dca12605.1
scaffold158	Augustus	exon	25024	25089	.	+	.	ID=Dca12605.1.exon6;Parent=Dca12605.1
scaffold158	Augustus	exon	25184	25306	.	+	.	ID=Dca12605.1.exon7;Parent=Dca12605.1
scaffold158	Augustus	exon	25442	25626	.	+	.	ID=Dca12605.1.exon8;Parent=Dca12605.1