Dca12625.1
Annotation
- 3-exons
- f-1
- sp|B9MYC3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_594620#GO:0005622;GO:0003676;GO:0008270#2F0P1C
- sp|B9RVS6_RICCO#Nucleic acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1172100#GO:0005622;GO:0003676;GO:0008270#2F0P1C
- Repeat List (scaffold158)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12625.1 |
1 |
547 |
547 |
53.93 |
547 |
53 |
6e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MYC3_POPTR |
1 |
479 |
479 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12625.1 |
318 |
547 |
547 |
15.17 |
230 |
34 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G03840.1 |
287 |
506 |
506 |
43.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold158 |
Augustus |
mRNA |
162281 |
165826 |
. |
- |
. |
ID=Dca12625.1;Parent=Dca12625 |
| scaffold158 |
Augustus |
exon |
162281 |
163418 |
. |
- |
. |
ID=Dca12625.1.exon1;Parent=Dca12625.1 |
| scaffold158 |
Augustus |
exon |
165051 |
165447 |
. |
- |
. |
ID=Dca12625.1.exon2;Parent=Dca12625.1 |
| scaffold158 |
Augustus |
exon |
165718 |
165826 |
. |
- |
. |
ID=Dca12625.1.exon3;Parent=Dca12625.1 |
