Dca12688.1
Annotation
- 4-exons
- f-1
- sp|A5B4U1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_026444#GO:0003676;GO:0015074#1F1P0C
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold1582)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12688.1 |
3 |
493 |
493 |
62.88 |
491 |
57 |
2e-163
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B4U1_VITVI |
103 |
627 |
689 |
76.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12688.1 |
226 |
486 |
493 |
21.7 |
261 |
40 |
4e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
525 |
780 |
1428 |
17.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1582 |
Augustus |
mRNA |
13837 |
15996 |
. |
+ |
. |
ID=Dca12688.1;Parent=Dca12688 |
| scaffold1582 |
Augustus |
exon |
13837 |
13899 |
. |
+ |
. |
ID=Dca12688.1.exon1;Parent=Dca12688.1 |
| scaffold1582 |
Augustus |
exon |
14026 |
14626 |
. |
+ |
. |
ID=Dca12688.1.exon2;Parent=Dca12688.1 |
| scaffold1582 |
Augustus |
exon |
14734 |
14764 |
. |
+ |
. |
ID=Dca12688.1.exon3;Parent=Dca12688.1 |
| scaffold1582 |
Augustus |
exon |
15210 |
15996 |
. |
+ |
. |
ID=Dca12688.1.exon4;Parent=Dca12688.1 |
