Dca12745.1
Annotation
- 3-exons
- f-1
- sp|E6Y5Q2_SOLLC#Gag-pol polyprotein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1586)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12745.1 |
89 |
160 |
160 |
28.75 |
72 |
64 |
7e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E6Y5Q2_SOLLC |
190 |
261 |
624 |
11.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12745.1 |
80 |
160 |
160 |
23.75 |
81 |
47 |
3e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
725 |
806 |
1539 |
5.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1586 |
Augustus |
mRNA |
25253 |
26292 |
. |
+ |
. |
ID=Dca12745.1;Parent=Dca12745 |
| scaffold1586 |
Augustus |
exon |
25253 |
25453 |
. |
+ |
. |
ID=Dca12745.1.exon1;Parent=Dca12745.1 |
| scaffold1586 |
Augustus |
exon |
25862 |
25922 |
. |
+ |
. |
ID=Dca12745.1.exon2;Parent=Dca12745.1 |
| scaffold1586 |
Augustus |
exon |
26072 |
26292 |
. |
+ |
. |
ID=Dca12745.1.exon3;Parent=Dca12745.1 |
