Carnation DB

Dca1275.1

Annotation

5-exons
f-1
sp|B9G2L4_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_28695#unknown#0F0P0C
AT3G52155.1 | Symbols: | Phosphoglycerate mutase family protein | chr3:19343740-19344722 FORWARD LENGTH=218
Repeat List (scaffold1037)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1275.1	18	169	184	55.97	152	68	1e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9G2L4_ORYSJ	2	153	153	99.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1275.1	16	169	184	55.97	154	67	4e-61
Target_name	Start	End	Length	Cov(%)
Os09t0287300-01	99	252	253	60.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1037	Augustus	mRNA	145938	148703	.	+	.	ID=Dca1275.1;Parent=Dca1275
scaffold1037	Augustus	exon	145938	145992	.	+	.	ID=Dca1275.1.exon1;Parent=Dca1275.1
scaffold1037	Augustus	exon	146072	146171	.	+	.	ID=Dca1275.1.exon2;Parent=Dca1275.1
scaffold1037	Augus-PASA	exon	146283	146462	.	+	.	ID=Dca1275.1.exon3;Parent=Dca1275.1
scaffold1037	Augus-PASA	exon	147555	147672	.	+	.	ID=Dca1275.1.exon4;Parent=Dca1275.1
scaffold1037	Augus-PASA	exon	148602	148703	.	+	.	ID=Dca1275.1.exon5;Parent=Dca1275.1