Carnation DB

Dca12751.1

Annotation

8-exons
f-511
sp|B9I1L8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_728200#unknown#0F0P0C
AT1G29170.1 | Symbols: WAVE2, ATSCAR3, SCAR3 | SCAR family protein | chr1:10190352-10194900 REVERSE LENGTH=1020
Repeat List (scaffold1586)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12751.1	1	108	130	54.61	108	66	1e-34
Target_name	Start	End	Length	Cov(%)
sp\|B9S9B2_RICCO	1	107	1111	9.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12751.1	1	109	130	49.23	109	59	2e-32
Target_name	Start	End	Length	Cov(%)
AT2G34150.2	1	108	821	13.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1586	Augustus	mRNA	81470	90988	.	+	.	ID=Dca12751.1;Parent=Dca12751
scaffold1586	Augustus	exon	81470	81627	.	+	.	ID=Dca12751.1.exon1;Parent=Dca12751.1
scaffold1586	Augustus	exon	84072	84235	.	+	.	ID=Dca12751.1.exon2;Parent=Dca12751.1
scaffold1586	Augustus	exon	86040	86109	.	+	.	ID=Dca12751.1.exon3;Parent=Dca12751.1
scaffold1586	Augustus	exon	86346	89200	.	+	.	ID=Dca12751.1.exon4;Parent=Dca12751.1
scaffold1586	Augustus	exon	89410	89678	.	+	.	ID=Dca12751.1.exon5;Parent=Dca12751.1
scaffold1586	Augustus	exon	89766	89873	.	+	.	ID=Dca12751.1.exon6;Parent=Dca12751.1
scaffold1586	Augustus	exon	90253	90360	.	+	.	ID=Dca12751.1.exon7;Parent=Dca12751.1
scaffold1586	Augustus	exon	90944	90988	.	+	.	ID=Dca12751.1.exon8;Parent=Dca12751.1