Dca12766.1
Annotation
- 2-exons
- f-1
- sp|B2BXJ4_ARALL#LTRGag-pol-polymerase 3#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#Name=LTR3#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1588)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12766.1 |
28 |
357 |
364 |
29.67 |
330 |
32 |
2e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B2BXJ4_ARALL |
76 |
412 |
1296 |
26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12766.1 |
28 |
150 |
364 |
12.08 |
123 |
36 |
1e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G48050.1 |
77 |
200 |
369 |
33.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1588 |
Augustus |
mRNA |
9041 |
10308 |
. |
- |
. |
ID=Dca12766.1;Parent=Dca12766 |
| scaffold1588 |
Augustus |
exon |
9041 |
10054 |
. |
- |
. |
ID=Dca12766.1.exon1;Parent=Dca12766.1 |
| scaffold1588 |
Augustus |
exon |
10228 |
10308 |
. |
- |
. |
ID=Dca12766.1.exon2;Parent=Dca12766.1 |
