Carnation DB

Dca12775.1

Annotation

6-exons
f-7
sp|B9R7D1_RICCO#Protein translocase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1590720#unknown#0F0P0C
Repeat List (scaffold15888)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12775.1	1	125	126	80.95	125	81	4e-55
Target_name	Start	End	Length	Cov(%)
sp\|B9R7D1_RICCO	145	271	272	46.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12775.1	1	125	126	71.42	125	72	2e-50
Target_name	Start	End	Length	Cov(%)
AT4G33350.1	144	267	268	46.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold15888	Augustus	mRNA	1020	4288	.	+	.	ID=Dca12775.1;Parent=Dca12775
scaffold15888	Augustus	exon	1020	1094	.	+	.	ID=Dca12775.1.exon1;Parent=Dca12775.1
scaffold15888	Augustus	exon	2083	2133	.	+	.	ID=Dca12775.1.exon2;Parent=Dca12775.1
scaffold15888	Augustus	exon	2921	2980	.	+	.	ID=Dca12775.1.exon3;Parent=Dca12775.1
scaffold15888	Augustus	exon	3077	3142	.	+	.	ID=Dca12775.1.exon4;Parent=Dca12775.1
scaffold15888	Augustus	exon	3801	3836	.	+	.	ID=Dca12775.1.exon5;Parent=Dca12775.1
scaffold15888	Augustus	exon	4196	4288	.	+	.	ID=Dca12775.1.exon6;Parent=Dca12775.1