Dca12789.1
Annotation
- 3-exons
- f-1
- sp|D7U2B0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g00650#GO:0000166;GO:0017069;GO:0000398#2F1P0C
- AT2G47580.1 | Symbols: U1A | spliceosomal protein U1A | chr2:19517229-19518686 FORWARD LENGTH=250
- Repeat List (scaffold1589)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12789.1 |
28 |
149 |
149 |
59.73 |
122 |
72 |
7e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7U2B0_VITVI |
108 |
232 |
232 |
53.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12789.1 |
44 |
149 |
149 |
52.34 |
106 |
73 |
2e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G47580.1 |
145 |
250 |
250 |
42.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1589 |
Augustus |
mRNA |
101725 |
102745 |
. |
+ |
. |
ID=Dca12789.1;Parent=Dca12789 |
| scaffold1589 |
Augustus |
exon |
101725 |
101800 |
. |
+ |
. |
ID=Dca12789.1.exon1;Parent=Dca12789.1 |
| scaffold1589 |
Augustus |
exon |
102087 |
102166 |
. |
+ |
. |
ID=Dca12789.1.exon2;Parent=Dca12789.1 |
| scaffold1589 |
Augustus |
exon |
102452 |
102745 |
. |
+ |
. |
ID=Dca12789.1.exon3;Parent=Dca12789.1 |
