Dca12790.1
Annotation
- 4-exons
- f-1
- sp|B9INQ1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_250331#unknown#0F0P0C
- Repeat List (scaffold15891)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12790.1 |
94 |
252 |
254 |
30.7 |
159 |
45 |
4e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9INQ1_POPTR |
1 |
172 |
172 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12790.1 |
94 |
252 |
254 |
27.55 |
159 |
42 |
4e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G30270.1 |
18 |
182 |
182 |
90.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15891 |
Augus-PASA |
mRNA |
926 |
3345 |
. |
- |
. |
ID=Dca12790.1;Parent=Dca12790 |
| scaffold15891 |
Augus-PASA |
exon |
926 |
1063 |
. |
- |
. |
ID=Dca12790.1.exon1;Parent=Dca12790.1 |
| scaffold15891 |
Augus-PASA |
exon |
1429 |
1617 |
. |
- |
. |
ID=Dca12790.1.exon2;Parent=Dca12790.1 |
| scaffold15891 |
Augustus |
exon |
1719 |
2037 |
. |
- |
. |
ID=Dca12790.1.exon3;Parent=Dca12790.1 |
| scaffold15891 |
Augustus |
exon |
3227 |
3345 |
. |
- |
. |
ID=Dca12790.1.exon4;Parent=Dca12790.1 |
