Carnation DB

Dca12796.1

Annotation

8-exons
f-1
sp|B9NAN6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_828760#GO:0031072;GO:0051082#2F0P0C
AT5G61670.1 | Symbols: | Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. | chr5:24783629-24785201 FORWARD LENGTH=307
Repeat List (scaffold159)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12796.1	1	333	333	73.57	333	74	8e-139
Target_name	Start	End	Length	Cov(%)
sp\|B9NAN6_POPTR	1	316	316	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12796.1	82	333	333	64.26	252	85	5e-130
Target_name	Start	End	Length	Cov(%)
AT5G61670.1	56	307	307	82.08

seqname	source	feature	start	end	score	strand	frame	group
scaffold159	Augus-PASA	mRNA	11235	17344	.	-	.	ID=Dca12796.1;Parent=Dca12796
scaffold159	Augus-PASA	exon	11235	11312	.	-	.	ID=Dca12796.1.exon1;Parent=Dca12796.1
scaffold159	Augus-PASA	exon	11654	11790	.	-	.	ID=Dca12796.1.exon2;Parent=Dca12796.1
scaffold159	Augus-PASA	exon	12130	12257	.	-	.	ID=Dca12796.1.exon3;Parent=Dca12796.1
scaffold159	Augus-PASA	exon	12496	12572	.	-	.	ID=Dca12796.1.exon4;Parent=Dca12796.1
scaffold159	Augus-PASA	exon	13445	13531	.	-	.	ID=Dca12796.1.exon5;Parent=Dca12796.1
scaffold159	Augus-PASA	exon	13622	13738	.	-	.	ID=Dca12796.1.exon6;Parent=Dca12796.1
scaffold159	Augus-PASA	exon	14114	14228	.	-	.	ID=Dca12796.1.exon7;Parent=Dca12796.1
scaffold159	Augus-PASA	exon	17082	17344	.	-	.	ID=Dca12796.1.exon8;Parent=Dca12796.1