Dca12817.1
Annotation
- 3-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold1590)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12817.1 |
150 |
246 |
247 |
23.48 |
97 |
60 |
5e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
1200 |
1296 |
1333 |
7.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12817.1 |
112 |
240 |
247 |
21.05 |
129 |
41 |
2e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1241 |
1359 |
1401 |
8.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1590 |
Augustus |
mRNA |
1387 |
5209 |
. |
- |
. |
ID=Dca12817.1;Parent=Dca12817 |
| scaffold1590 |
Augustus |
exon |
1387 |
1681 |
. |
- |
. |
ID=Dca12817.1.exon1;Parent=Dca12817.1 |
| scaffold1590 |
Augustus |
exon |
3383 |
3772 |
. |
- |
. |
ID=Dca12817.1.exon2;Parent=Dca12817.1 |
| scaffold1590 |
Augustus |
exon |
5151 |
5209 |
. |
- |
. |
ID=Dca12817.1.exon3;Parent=Dca12817.1 |
