Carnation DB

Dca12825.1

Annotation

8-exons
f-1
sp|F6HNT7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g02360#GO:0005737;GO:0004349;GO:0004350;GO:0006561#2F1P1C
sp|Q9XGC4_VITVI#Pyrroline-5-carboxylate synthetase#Vitis vinifera (Grape)#Name=p5cs#GO:0005737;GO:0004349;GO:0004350;GO:0006561#2F1P1C
Repeat List (scaffold1590)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12825.1	4	349	352	78.69	346	81	7e-164
Target_name	Start	End	Length	Cov(%)
sp\|F6HNT7_VITVI	20	365	717	48.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12825.1	4	349	352	76.13	346	78	6e-160
Target_name	Start	End	Length	Cov(%)
Os05t0455500-01	20	365	567	61.02

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1590	Augustus	mRNA	62384	65350	.	-	.	ID=Dca12825.1;Parent=Dca12825
scaffold1590	Augustus	exon	62384	62560	.	-	.	ID=Dca12825.1.exon1;Parent=Dca12825.1
scaffold1590	Augustus	exon	62674	62824	.	-	.	ID=Dca12825.1.exon2;Parent=Dca12825.1
scaffold1590	Augustus	exon	62979	63256	.	-	.	ID=Dca12825.1.exon3;Parent=Dca12825.1
scaffold1590	Augustus	exon	63684	63845	.	-	.	ID=Dca12825.1.exon4;Parent=Dca12825.1
scaffold1590	Augustus	exon	63937	64039	.	-	.	ID=Dca12825.1.exon5;Parent=Dca12825.1
scaffold1590	Augustus	exon	64476	64579	.	-	.	ID=Dca12825.1.exon6;Parent=Dca12825.1
scaffold1590	Augustus	exon	64707	64778	.	-	.	ID=Dca12825.1.exon7;Parent=Dca12825.1
scaffold1590	Augustus	exon	65339	65350	.	-	.	ID=Dca12825.1.exon8;Parent=Dca12825.1