Carnation DB

Dca12863.1

Annotation

12-exons
f-1
sp|D7THP4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g00290#unknown#0F0P0C
sp|B9T263_RICCO#Pectin acetylesterase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0916250#unknown#0F0P0C
Repeat List (scaffold1593)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12863.1	1	420	422	62.79	420	63	1e-159
Target_name	Start	End	Length	Cov(%)
sp\|D7THP4_VITVI	1	411	414	99.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12863.1	1	420	422	55.45	420	55	2e-145
Target_name	Start	End	Length	Cov(%)
AT3G09410.1	1	427	427	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1593	Augus-PASA	mRNA	42484	53424	.	-	.	ID=Dca12863.1;Parent=Dca12863
scaffold1593	Augus-PASA	exon	42484	42597	.	-	.	ID=Dca12863.1.exon1;Parent=Dca12863.1
scaffold1593	Augus-PASA	exon	43123	43265	.	-	.	ID=Dca12863.1.exon2;Parent=Dca12863.1
scaffold1593	Augus-PASA	exon	43968	44073	.	-	.	ID=Dca12863.1.exon3;Parent=Dca12863.1
scaffold1593	Augus-PASA	exon	45283	45360	.	-	.	ID=Dca12863.1.exon4;Parent=Dca12863.1
scaffold1593	Augus-PASA	exon	45450	45503	.	-	.	ID=Dca12863.1.exon5;Parent=Dca12863.1
scaffold1593	Augus-PASA	exon	46143	46203	.	-	.	ID=Dca12863.1.exon6;Parent=Dca12863.1
scaffold1593	Augus-PASA	exon	47705	47829	.	-	.	ID=Dca12863.1.exon7;Parent=Dca12863.1
scaffold1593	Augustus	exon	50189	50278	.	-	.	ID=Dca12863.1.exon8;Parent=Dca12863.1
scaffold1593	Augustus	exon	50392	50471	.	-	.	ID=Dca12863.1.exon9;Parent=Dca12863.1
scaffold1593	Augustus	exon	51438	51567	.	-	.	ID=Dca12863.1.exon10;Parent=Dca12863.1
scaffold1593	Augustus	exon	53049	53131	.	-	.	ID=Dca12863.1.exon11;Parent=Dca12863.1
scaffold1593	Augustus	exon	53220	53424	.	-	.	ID=Dca12863.1.exon12;Parent=Dca12863.1