Dca12888.1
Annotation
- 3-exons
- f-1
- sp|F6GU17_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g02670#GO:0016021;GO:0005249#1F0P1C
- sp|G7JND3_MEDTR#CNGC5-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g058730#GO:0016020;GO:0005249#1F0P1C
- Repeat List (scaffold15957)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12888.1 |
15 |
132 |
132 |
49.24 |
118 |
55 |
1e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6GU17_VITVI |
149 |
266 |
713 |
16.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12888.1 |
15 |
132 |
132 |
43.18 |
118 |
48 |
2e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G28260.1 |
137 |
254 |
678 |
17.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold15957 |
Augustus |
mRNA |
106 |
991 |
. |
- |
. |
ID=Dca12888.1;Parent=Dca12888 |
| scaffold15957 |
Augustus |
exon |
106 |
315 |
. |
- |
. |
ID=Dca12888.1.exon1;Parent=Dca12888.1 |
| scaffold15957 |
Augustus |
exon |
549 |
692 |
. |
- |
. |
ID=Dca12888.1.exon2;Parent=Dca12888.1 |
| scaffold15957 |
Augustus |
exon |
950 |
991 |
. |
- |
. |
ID=Dca12888.1.exon3;Parent=Dca12888.1 |
