Dca12890.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1596)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12890.1 |
1 |
481 |
481 |
76.29 |
481 |
72 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
521 |
1026 |
1717 |
29.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca12890.1 |
317 |
481 |
481 |
12.47 |
165 |
37 |
1e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
237 |
382 |
707 |
20.65 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1596 |
Augustus |
mRNA |
14264 |
15996 |
. |
- |
. |
ID=Dca12890.1;Parent=Dca12890 |
| scaffold1596 |
Augustus |
exon |
14264 |
15159 |
. |
- |
. |
ID=Dca12890.1.exon1;Parent=Dca12890.1 |
| scaffold1596 |
Augustus |
exon |
15265 |
15414 |
. |
- |
. |
ID=Dca12890.1.exon2;Parent=Dca12890.1 |
| scaffold1596 |
Augustus |
exon |
15597 |
15996 |
. |
- |
. |
ID=Dca12890.1.exon3;Parent=Dca12890.1 |
