Carnation DB

Dca12911.1

Annotation

5-exons
f-1
sp|C5YM86_SORBI#Putative uncharacterized protein Sb07g022850#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb07g022850#GO:0003677;GO:0004803;GO:0006313#2F1P0C
Os06t0704400-02 Transposase, MuDR, plant domain containing protein.
Repeat List (scaffold1597)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12911.1	326	709	740	16.21	384	31	4e-38
Target_name	Start	End	Length	Cov(%)
sp\|C5YM86_SORBI	85	459	459	81.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12911.1	537	722	740	9.18	186	36	2e-27
Target_name	Start	End	Length	Cov(%)
Os06t0704400-02	351	539	805	23.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1597	Augustus	mRNA	20920	24642	.	-	.	ID=Dca12911.1;Parent=Dca12911
scaffold1597	Augustus	exon	20920	21200	.	-	.	ID=Dca12911.1.exon1;Parent=Dca12911.1
scaffold1597	Augustus	exon	21368	21722	.	-	.	ID=Dca12911.1.exon2;Parent=Dca12911.1
scaffold1597	Augustus	exon	22238	22495	.	-	.	ID=Dca12911.1.exon3;Parent=Dca12911.1
scaffold1597	Augustus	exon	22942	23754	.	-	.	ID=Dca12911.1.exon4;Parent=Dca12911.1
scaffold1597	Augustus	exon	23848	24642	.	-	.	ID=Dca12911.1.exon5;Parent=Dca12911.1