Carnation DB

Dca12933.1

Annotation

5-exons
f-1
sp|A5AWW8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g07810#unknown#0F0P0C
AT2G42280.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr2:17611428-17613163 REVERSE LENGTH=359
Repeat List (scaffold1599)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12933.1	1	191	194	62.37	191	54	2e-55
Target_name	Start	End	Length	Cov(%)
sp\|A5AWW8_VITVI	157	383	394	57.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12933.1	63	192	194	45.87	130	60	6e-44
Target_name	Start	End	Length	Cov(%)
AT2G42280.1	204	353	359	41.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1599	Augustus	mRNA	52289	53327	.	+	.	ID=Dca12933.1;Parent=Dca12933
scaffold1599	Augustus	exon	52289	52522	.	+	.	ID=Dca12933.1.exon1;Parent=Dca12933.1
scaffold1599	Augustus	exon	52705	52872	.	+	.	ID=Dca12933.1.exon2;Parent=Dca12933.1
scaffold1599	Augustus	exon	52965	53030	.	+	.	ID=Dca12933.1.exon3;Parent=Dca12933.1
scaffold1599	Augustus	exon	53128	53196	.	+	.	ID=Dca12933.1.exon4;Parent=Dca12933.1
scaffold1599	Augustus	exon	53280	53327	.	+	.	ID=Dca12933.1.exon5;Parent=Dca12933.1