Carnation DB

Dca12953.1

Annotation

6-exons
f-1
sp|Q5QJB2_TOBAC#Harpin binding protein 1#Nicotiana tabacum (Common tobacco)#Name=HrBP1#GO:0009507;GO:0005198#1F0P1C
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12953.1	15	225	315	48.88	211	72	2e-83
Target_name	Start	End	Length	Cov(%)
sp\|Q5QJB2_TOBAC	56	271	276	78.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12953.1	44	225	315	42.53	182	74	6e-76
Target_name	Start	End	Length	Cov(%)
AT3G23400.1	97	279	284	64.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	118911	123736	.	-	.	ID=Dca12953.1;Parent=Dca12953
scaffold16	Augustus	exon	118911	118978	.	-	.	ID=Dca12953.1.exon1;Parent=Dca12953.1
scaffold16	Augustus	exon	119831	120052	.	-	.	ID=Dca12953.1.exon2;Parent=Dca12953.1
scaffold16	Augustus	exon	122227	122403	.	-	.	ID=Dca12953.1.exon3;Parent=Dca12953.1
scaffold16	Augus-PASA	exon	122488	122614	.	-	.	ID=Dca12953.1.exon4;Parent=Dca12953.1
scaffold16	Augus-PASA	exon	122709	122945	.	-	.	ID=Dca12953.1.exon5;Parent=Dca12953.1
scaffold16	Augus-PASA	exon	123620	123736	.	-	.	ID=Dca12953.1.exon6;Parent=Dca12953.1