Carnation DB

Dca12968.1

Annotation

7-exons
f-1
sp|F6H734_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0077g01160#unknown#0F0P0C
AT2G47410.1 | Symbols: | WD40/YVTN repeat-like-containing domain;Bromodomain | chr2:19449133-19456991 FORWARD LENGTH=1520
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12968.1	148	304	339	28.9	157	43	4e-31
Target_name	Start	End	Length	Cov(%)
sp\|F6H734_VITVI	561	789	1750	13.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12968.1	148	330	339	29.2	183	39	1e-27
Target_name	Start	End	Length	Cov(%)
AT2G47410.1	549	805	1520	16.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	218258	223998	.	+	.	ID=Dca12968.1;Parent=Dca12968
scaffold16	Augustus	exon	218258	218418	.	+	.	ID=Dca12968.1.exon1;Parent=Dca12968.1
scaffold16	Augustus	exon	221913	222104	.	+	.	ID=Dca12968.1.exon2;Parent=Dca12968.1
scaffold16	Augustus	exon	222447	222531	.	+	.	ID=Dca12968.1.exon3;Parent=Dca12968.1
scaffold16	Augustus	exon	223005	223079	.	+	.	ID=Dca12968.1.exon4;Parent=Dca12968.1
scaffold16	Augustus	exon	223288	223358	.	+	.	ID=Dca12968.1.exon5;Parent=Dca12968.1
scaffold16	Augustus	exon	223461	223761	.	+	.	ID=Dca12968.1.exon6;Parent=Dca12968.1
scaffold16	Augustus	exon	223864	223998	.	+	.	ID=Dca12968.1.exon7;Parent=Dca12968.1