Carnation DB

Dca12972.1

Annotation

5-exons
f-1
sp|B9HXE7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_883724#GO:0003824#1F0P0C
AT3G05640.1 | Symbols: | Protein phosphatase 2C family protein | chr3:1640610-1642227 REVERSE LENGTH=358
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12972.1	1	352	354	59.88	352	59	4e-114
Target_name	Start	End	Length	Cov(%)
sp\|B9HXE7_POPTR	1	357	375	95.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12972.1	1	348	354	55.08	348	55	1e-107
Target_name	Start	End	Length	Cov(%)
AT3G05640.1	1	350	358	97.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	251241	253236	.	+	.	ID=Dca12972.1;Parent=Dca12972
scaffold16	Augustus	exon	251241	251462	.	+	.	ID=Dca12972.1.exon1;Parent=Dca12972.1
scaffold16	Augustus	exon	251569	251886	.	+	.	ID=Dca12972.1.exon2;Parent=Dca12972.1
scaffold16	Augustus	exon	252405	252522	.	+	.	ID=Dca12972.1.exon3;Parent=Dca12972.1
scaffold16	Augustus	exon	252615	252835	.	+	.	ID=Dca12972.1.exon4;Parent=Dca12972.1
scaffold16	Augustus	exon	253051	253236	.	+	.	ID=Dca12972.1.exon5;Parent=Dca12972.1