Carnation DB

Dca12974.1

Annotation

6-exons
f-1
sp|F6H6V7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0077g01760#GO:0004650;GO:0005975#1F1P0C
AT3G16850.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:5748692-5750981 FORWARD LENGTH=455
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12974.1	15	429	451	63.41	415	69	2e-169
Target_name	Start	End	Length	Cov(%)
sp\|F6H6V7_VITVI	13	428	455	91.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12974.1	1	434	451	57.2	434	60	4e-149
Target_name	Start	End	Length	Cov(%)
AT3G16850.1	1	432	455	94.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	268416	271278	.	+	.	ID=Dca12974.1;Parent=Dca12974
scaffold16	Augustus	exon	268416	268427	.	+	.	ID=Dca12974.1.exon1;Parent=Dca12974.1
scaffold16	Augustus	exon	269378	269695	.	+	.	ID=Dca12974.1.exon2;Parent=Dca12974.1
scaffold16	Augustus	exon	269828	269948	.	+	.	ID=Dca12974.1.exon3;Parent=Dca12974.1
scaffold16	Augustus	exon	270058	270232	.	+	.	ID=Dca12974.1.exon4;Parent=Dca12974.1
scaffold16	Augustus	exon	270322	270392	.	+	.	ID=Dca12974.1.exon5;Parent=Dca12974.1
scaffold16	Augustus	exon	270620	271278	.	+	.	ID=Dca12974.1.exon6;Parent=Dca12974.1