Carnation DB

Dca12979.1

Annotation

5-exons
f-1
sp|F4NCI7_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
sp|Q2QQV8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g29700#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12979.1	258	868	871	38.92	611	50	0
Target_name	Start	End	Length	Cov(%)
sp\|F4NCI7_BETVU	134	813	1362	49.92

AtOs (Arabidopsis thaliana & Oryza sativa)

No data

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	307162	311092	.	+	.	ID=Dca12979.1;Parent=Dca12979
scaffold16	Augustus	exon	307162	307668	.	+	.	ID=Dca12979.1.exon1;Parent=Dca12979.1
scaffold16	Augustus	exon	307735	307953	.	+	.	ID=Dca12979.1.exon2;Parent=Dca12979.1
scaffold16	Augustus	exon	308145	308181	.	+	.	ID=Dca12979.1.exon3;Parent=Dca12979.1
scaffold16	Augustus	exon	309038	310147	.	+	.	ID=Dca12979.1.exon4;Parent=Dca12979.1
scaffold16	Augustus	exon	310350	311092	.	+	.	ID=Dca12979.1.exon5;Parent=Dca12979.1