Carnation DB

Dca12998.1

Annotation

7-exons
f-1
sp|B9RZN4_RICCO#Protein translocase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1000020#GO:0016021#0F0P1C
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12998.1	1	173	173	77.45	173	74	2e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9RZN4_RICCO	1	181	181	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12998.1	8	173	173	68.2	166	68	5e-61
Target_name	Start	End	Length	Cov(%)
AT4G16160.2	7	178	178	96.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	456488	458197	.	+	.	ID=Dca12998.1;Parent=Dca12998
scaffold16	Augustus	exon	456488	456616	.	+	.	ID=Dca12998.1.exon1;Parent=Dca12998.1
scaffold16	Augustus	exon	457263	457314	.	+	.	ID=Dca12998.1.exon2;Parent=Dca12998.1
scaffold16	Augustus	exon	457441	457503	.	+	.	ID=Dca12998.1.exon3;Parent=Dca12998.1
scaffold16	Augustus	exon	457611	457642	.	+	.	ID=Dca12998.1.exon4;Parent=Dca12998.1
scaffold16	Augustus	exon	457744	457777	.	+	.	ID=Dca12998.1.exon5;Parent=Dca12998.1
scaffold16	Augustus	exon	457867	457934	.	+	.	ID=Dca12998.1.exon6;Parent=Dca12998.1
scaffold16	Augustus	exon	458054	458197	.	+	.	ID=Dca12998.1.exon7;Parent=Dca12998.1