Carnation DB

Dca12999.1

Annotation

22-exons
f-1510
sp|B9F7X8_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_10557#unknown#0F0P0C
sp|Q10MJ9_ORYSJ#Expressed protein#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g19340#unknown#0F0P0C
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12999.1	2	1099	1099	48.77	1098	45	0
Target_name	Start	End	Length	Cov(%)
sp\|B9F7X8_ORYSJ	451	1601	1601	71.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12999.1	722	1099	1099	15.19	378	44	9e-81
Target_name	Start	End	Length	Cov(%)
AT2G47410.1	1163	1519	1520	23.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	459001	468593	.	-	.	ID=Dca12999.1;Parent=Dca12999
scaffold16	Augustus	exon	459001	459226	.	-	.	ID=Dca12999.1.exon1;Parent=Dca12999.1
scaffold16	Augustus	exon	459360	459418	.	-	.	ID=Dca12999.1.exon2;Parent=Dca12999.1
scaffold16	Augustus	exon	459919	460494	.	-	.	ID=Dca12999.1.exon3;Parent=Dca12999.1
scaffold16	Augustus	exon	460586	462124	.	-	.	ID=Dca12999.1.exon4;Parent=Dca12999.1
scaffold16	Augustus	exon	462488	462879	.	-	.	ID=Dca12999.1.exon5;Parent=Dca12999.1
scaffold16	Augustus	exon	463272	463326	.	-	.	ID=Dca12999.1.exon6;Parent=Dca12999.1
scaffold16	Augustus	exon	463495	463554	.	-	.	ID=Dca12999.1.exon7;Parent=Dca12999.1
scaffold16	Augustus	exon	463653	463749	.	-	.	ID=Dca12999.1.exon8;Parent=Dca12999.1
scaffold16	Augustus	exon	463875	463945	.	-	.	ID=Dca12999.1.exon9;Parent=Dca12999.1
scaffold16	Augustus	exon	464022	464102	.	-	.	ID=Dca12999.1.exon10;Parent=Dca12999.1
scaffold16	Augustus	exon	464199	464269	.	-	.	ID=Dca12999.1.exon11;Parent=Dca12999.1
scaffold16	Augustus	exon	464550	464713	.	-	.	ID=Dca12999.1.exon12;Parent=Dca12999.1
scaffold16	Augustus	exon	464973	465050	.	-	.	ID=Dca12999.1.exon13;Parent=Dca12999.1
scaffold16	Augustus	exon	465398	465501	.	-	.	ID=Dca12999.1.exon14;Parent=Dca12999.1
scaffold16	Augustus	exon	465627	465745	.	-	.	ID=Dca12999.1.exon15;Parent=Dca12999.1
scaffold16	Augustus	exon	465828	465922	.	-	.	ID=Dca12999.1.exon16;Parent=Dca12999.1
scaffold16	Augustus	exon	466326	466432	.	-	.	ID=Dca12999.1.exon17;Parent=Dca12999.1
scaffold16	Augustus	exon	466528	466605	.	-	.	ID=Dca12999.1.exon18;Parent=Dca12999.1
scaffold16	Augustus	exon	466695	466804	.	-	.	ID=Dca12999.1.exon19;Parent=Dca12999.1
scaffold16	Augustus	exon	467497	467733	.	-	.	ID=Dca12999.1.exon20;Parent=Dca12999.1
scaffold16	Augustus	exon	467910	468064	.	-	.	ID=Dca12999.1.exon21;Parent=Dca12999.1
scaffold16	Augustus	exon	468259	468593	.	-	.	ID=Dca12999.1.exon22;Parent=Dca12999.1