Carnation DB

Dca13.1

Annotation

8-exons
f-1
sp|D7U819_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g02700#GO:0003676;GO:0000166#2F0P0C
AT4G00830.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:352782-354965 FORWARD LENGTH=495
Repeat List (scaffold1)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13.1	1	471	471	60.93	471	60	2e-159
Target_name	Start	End	Length	Cov(%)
sp\|D7U819_VITVI	1	476	476	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13.1	48	471	471	52.65	424	58	4e-142
Target_name	Start	End	Length	Cov(%)
AT4G00830.1	71	495	495	85.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1	Augustus	mRNA	128340	130973	.	+	.	ID=Dca13.1;Parent=Dca13
scaffold1	Augustus	exon	128340	128702	.	+	.	ID=Dca13.1.exon1;Parent=Dca13.1
scaffold1	Augustus	exon	128802	128918	.	+	.	ID=Dca13.1.exon2;Parent=Dca13.1
scaffold1	Augustus	exon	129039	129179	.	+	.	ID=Dca13.1.exon3;Parent=Dca13.1
scaffold1	Augustus	exon	129283	129459	.	+	.	ID=Dca13.1.exon4;Parent=Dca13.1
scaffold1	Augustus	exon	129750	129957	.	+	.	ID=Dca13.1.exon5;Parent=Dca13.1
scaffold1	Augustus	exon	130364	130539	.	+	.	ID=Dca13.1.exon6;Parent=Dca13.1
scaffold1	Augustus	exon	130629	130714	.	+	.	ID=Dca13.1.exon7;Parent=Dca13.1
scaffold1	Augustus	exon	130826	130973	.	+	.	ID=Dca13.1.exon8;Parent=Dca13.1