Carnation DB

Dca130.1

Annotation

5-exons
f-1
sp|Q2HU05_MEDTR#Integrase, catalytic region#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MtrDRAFT_AC149577g2v1#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold10)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca130.1	436	1420	1681	29.56	985	51	0
Target_name	Start	End	Length	Cov(%)
sp\|Q2HU05_MEDTR	670	1613	1715	55.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca130.1	434	1420	1681	22.01	987	38	3e-176
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	377	1294	1401	65.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10	Augustus	mRNA	67600	74968	.	-	.	ID=Dca130.1;Parent=Dca130
scaffold10	Augustus	exon	67600	68382	.	-	.	ID=Dca130.1.exon1;Parent=Dca130.1
scaffold10	Augustus	exon	69659	72640	.	-	.	ID=Dca130.1.exon2;Parent=Dca130.1
scaffold10	Augustus	exon	73131	73715	.	-	.	ID=Dca130.1.exon3;Parent=Dca130.1
scaffold10	Augustus	exon	73888	74357	.	-	.	ID=Dca130.1.exon4;Parent=Dca130.1
scaffold10	Augustus	exon	74743	74968	.	-	.	ID=Dca130.1.exon5;Parent=Dca130.1