Carnation DB

Dca13014.1

Annotation

6-exons
f-1
sp|B9GPM7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_753848#GO:0016021;GO:0055085#0F1P1C
AT1G76520.1 | Symbols: | Auxin efflux carrier family protein | chr1:28715384-28717289 FORWARD LENGTH=390
Repeat List (scaffold160)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13014.1	1	154	345	29.85	154	67	5e-58
Target_name	Start	End	Length	Cov(%)
sp\|B9GPM7_POPTR	1	154	407	37.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13014.1	1	157	345	27.53	157	61	1e-53
Target_name	Start	End	Length	Cov(%)
AT1G76520.1	2	158	390	40.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold160	Augustus	mRNA	21121	29290	.	+	.	ID=Dca13014.1;Parent=Dca13014
scaffold160	Augustus	exon	21121	21255	.	+	.	ID=Dca13014.1.exon1;Parent=Dca13014.1
scaffold160	Augustus	exon	21364	21443	.	+	.	ID=Dca13014.1.exon2;Parent=Dca13014.1
scaffold160	Augustus	exon	21533	21657	.	+	.	ID=Dca13014.1.exon3;Parent=Dca13014.1
scaffold160	Augustus	exon	21994	22115	.	+	.	ID=Dca13014.1.exon4;Parent=Dca13014.1
scaffold160	Augustus	exon	25803	25860	.	+	.	ID=Dca13014.1.exon5;Parent=Dca13014.1
scaffold160	Augustus	exon	28773	29290	.	+	.	ID=Dca13014.1.exon6;Parent=Dca13014.1