Carnation DB

Dca13043.1

Annotation

7-exons
f-1
sp|G5DVX0_SILLA#Putative uncharacterized protein#Silene latifolia (White campion) (Bladder campion)#unknown#unknown#0F0P0C
Os12t0428200-00 Autophagy-related protein 1010 domain containing protein.
Repeat List (scaffold1600)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13043.1	1	216	217	88.94	216	90	1e-110
Target_name	Start	End	Length	Cov(%)
sp\|G5DVX0_SILLA	1	215	215	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13043.1	12	217	217	66.82	206	71	8e-83
Target_name	Start	End	Length	Cov(%)
AT5G66930.3	48	251	251	81.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1600	Augustus	mRNA	52551	56298	.	+	.	ID=Dca13043.1;Parent=Dca13043
scaffold1600	Augustus	exon	52551	52583	.	+	.	ID=Dca13043.1.exon1;Parent=Dca13043.1
scaffold1600	Augustus	exon	52691	52727	.	+	.	ID=Dca13043.1.exon2;Parent=Dca13043.1
scaffold1600	Augustus	exon	53842	53927	.	+	.	ID=Dca13043.1.exon3;Parent=Dca13043.1
scaffold1600	Augustus	exon	54659	54754	.	+	.	ID=Dca13043.1.exon4;Parent=Dca13043.1
scaffold1600	Augustus	exon	55148	55310	.	+	.	ID=Dca13043.1.exon5;Parent=Dca13043.1
scaffold1600	Augustus	exon	55417	55579	.	+	.	ID=Dca13043.1.exon6;Parent=Dca13043.1
scaffold1600	Augustus	exon	56223	56298	.	+	.	ID=Dca13043.1.exon7;Parent=Dca13043.1