Dca13077.1
Annotation
- 4-exons
- f-1
- sp|Q4JFW8_SOLLC#Green flesh protein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#Name=SGR1#unknown#0F0P0C
- Repeat List (scaffold1602)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13077.1 |
1 |
289 |
290 |
63.79 |
289 |
64 |
1e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q4JFW8_SOLLC |
1 |
271 |
272 |
99.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13077.1 |
1 |
273 |
290 |
62.06 |
273 |
66 |
1e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G22920.1 |
1 |
246 |
268 |
91.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1602 |
Augustus |
mRNA |
32173 |
34226 |
. |
+ |
. |
ID=Dca13077.1;Parent=Dca13077 |
| scaffold1602 |
Augustus |
exon |
32173 |
32310 |
. |
+ |
. |
ID=Dca13077.1.exon1;Parent=Dca13077.1 |
| scaffold1602 |
Augustus |
exon |
32621 |
32794 |
. |
+ |
. |
ID=Dca13077.1.exon2;Parent=Dca13077.1 |
| scaffold1602 |
Augustus |
exon |
33255 |
33422 |
. |
+ |
. |
ID=Dca13077.1.exon3;Parent=Dca13077.1 |
| scaffold1602 |
Augustus |
exon |
33834 |
34226 |
. |
+ |
. |
ID=Dca13077.1.exon4;Parent=Dca13077.1 |
