Dca13135.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold16060)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13135.1 |
57 |
389 |
423 |
26.95 |
333 |
30 |
2e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
397 |
1501 |
26.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13135.1 |
78 |
224 |
423 |
12.05 |
147 |
30 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
250 |
296 |
57.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16060 |
Augustus |
mRNA |
1514 |
3662 |
. |
+ |
. |
ID=Dca13135.1;Parent=Dca13135 |
| scaffold16060 |
Augustus |
exon |
1514 |
1630 |
. |
+ |
. |
ID=Dca13135.1.exon1;Parent=Dca13135.1 |
| scaffold16060 |
Augustus |
exon |
2437 |
2745 |
. |
+ |
. |
ID=Dca13135.1.exon2;Parent=Dca13135.1 |
| scaffold16060 |
Augustus |
exon |
2817 |
3662 |
. |
+ |
. |
ID=Dca13135.1.exon3;Parent=Dca13135.1 |
