Dca13171.1
Annotation
- 2-exons
- f-1
- sp|A9P901_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817941#unknown#0F0P0C
- Os05t0440100-02 Similar to (RAP Annotation release2) Histone deacetylase superfamily protein.
- Repeat List (scaffold1609)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13171.1 |
11 |
124 |
243 |
31.27 |
114 |
67 |
5e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9P901_POPTR |
100 |
213 |
254 |
44.88 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13171.1 |
11 |
124 |
243 |
29.62 |
114 |
63 |
1e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os05t0440100-02 |
103 |
217 |
275 |
41.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1609 |
Augustus |
mRNA |
52758 |
53573 |
. |
+ |
. |
ID=Dca13171.1;Parent=Dca13171 |
| scaffold1609 |
Augustus |
exon |
52758 |
53129 |
. |
+ |
. |
ID=Dca13171.1.exon1;Parent=Dca13171.1 |
| scaffold1609 |
Augustus |
exon |
53214 |
53573 |
. |
+ |
. |
ID=Dca13171.1.exon2;Parent=Dca13171.1 |
