Carnation DB

Dca13185.1

Annotation

8-exons
f-1
sp|D7SY28_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0105g00550#GO:0005743;GO:0005507;GO:0006878;GO:0006825;GO:0008535#1F3P1C
sp|D7L7P7_ARALL#Electron transport SCO1/SenC family protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478203#GO:0005743;GO:0005507;GO:0006878;GO:0006825;GO:0008535#1F3P1C
Repeat List (scaffold161)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13185.1	57	367	422	45.02	311	61	5e-101
Target_name	Start	End	Length	Cov(%)
sp\|D7SY28_VITVI	3	295	302	97.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13185.1	152	374	422	39.57	223	75	1e-100
Target_name	Start	End	Length	Cov(%)
AT3G08950.1	111	334	334	67.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold161	Augustus	mRNA	83224	89108	.	-	.	ID=Dca13185.1;Parent=Dca13185
scaffold161	Augustus	exon	83224	83388	.	-	.	ID=Dca13185.1.exon1;Parent=Dca13185.1
scaffold161	Augustus	exon	85685	85772	.	-	.	ID=Dca13185.1.exon2;Parent=Dca13185.1
scaffold161	Augus-PASA	exon	86042	86174	.	-	.	ID=Dca13185.1.exon3;Parent=Dca13185.1
scaffold161	Augustus	exon	86741	86827	.	-	.	ID=Dca13185.1.exon4;Parent=Dca13185.1
scaffold161	Augus-PASA	exon	87015	87227	.	-	.	ID=Dca13185.1.exon5;Parent=Dca13185.1
scaffold161	Augus-PASA	exon	87961	88051	.	-	.	ID=Dca13185.1.exon6;Parent=Dca13185.1
scaffold161	Augus-PASA	exon	88521	88838	.	-	.	ID=Dca13185.1.exon7;Parent=Dca13185.1
scaffold161	Augus-PASA	exon	88935	89108	.	-	.	ID=Dca13185.1.exon8;Parent=Dca13185.1
scaffold161	Augustus	mRNA	83224	89108	.	-	.	ID=Dca13185.2;Parent=Dca13185
scaffold161	Augustus	exon	83224	83388	.	-	.	ID=Dca13185.2.exon1;Parent=Dca13185.2
scaffold161	Augustus	exon	85685	85772	.	-	.	ID=Dca13185.2.exon2;Parent=Dca13185.2
scaffold161	Augus-PASA	exon	86042	86174	.	-	.	ID=Dca13185.2.exon3;Parent=Dca13185.2
scaffold161	Augus-PASA	exon	86741	86830	.	-	.	ID=Dca13185.2.exon4;Parent=Dca13185.2
scaffold161	Augus-PASA	exon	87015	87227	.	-	.	ID=Dca13185.2.exon5;Parent=Dca13185.2
scaffold161	Augus-PASA	exon	87961	88051	.	-	.	ID=Dca13185.2.exon6;Parent=Dca13185.2
scaffold161	Augus-PASA	exon	88521	88838	.	-	.	ID=Dca13185.2.exon7;Parent=Dca13185.2
scaffold161	Augus-PASA	exon	88935	89108	.	-	.	ID=Dca13185.2.exon8;Parent=Dca13185.2