Dca13208.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1610)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13208.1 |
88 |
275 |
280 |
47.5 |
188 |
70 |
5e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
122 |
312 |
964 |
19.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13208.1 |
100 |
274 |
280 |
27.14 |
175 |
43 |
3e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
548 |
726 |
1428 |
12.53 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1610 |
Augustus |
mRNA |
2576 |
4726 |
. |
- |
. |
ID=Dca13208.1;Parent=Dca13208 |
| scaffold1610 |
Augustus |
exon |
2576 |
3255 |
. |
- |
. |
ID=Dca13208.1.exon1;Parent=Dca13208.1 |
| scaffold1610 |
Augustus |
exon |
4564 |
4726 |
. |
- |
. |
ID=Dca13208.1.exon2;Parent=Dca13208.1 |
