Dca13253.1
Annotation
- 4-exons
- f-1
- sp|O82216_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g23880#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1614)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13253.1 |
1 |
170 |
292 |
26.02 |
170 |
43 |
4e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O82216_ARATH |
107 |
279 |
1216 |
14.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13253.1 |
11 |
155 |
292 |
17.8 |
145 |
36 |
3e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
474 |
621 |
626 |
23.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1614 |
Augustus |
mRNA |
11538 |
13456 |
. |
+ |
. |
ID=Dca13253.1;Parent=Dca13253 |
| scaffold1614 |
Augustus |
exon |
11538 |
12050 |
. |
+ |
. |
ID=Dca13253.1.exon1;Parent=Dca13253.1 |
| scaffold1614 |
Augustus |
exon |
12610 |
12679 |
. |
+ |
. |
ID=Dca13253.1.exon2;Parent=Dca13253.1 |
| scaffold1614 |
Augustus |
exon |
13081 |
13286 |
. |
+ |
. |
ID=Dca13253.1.exon3;Parent=Dca13253.1 |
| scaffold1614 |
Augustus |
exon |
13367 |
13456 |
. |
+ |
. |
ID=Dca13253.1.exon4;Parent=Dca13253.1 |
